World’s largest genetic study of ‘moliness’ helps unravel mysteries of melanoma

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QIMR Berghofer scientists have uncovered hundreds of genes that play a role in the growth of both moles and melanoma, in a discovery that could lead to new ways of preventing and treating the deadliest form of skin cancer. The world’s largest genetics study of ‘moliness’, published in Nature Communications, is unravelling the complex causes of both moles and melanomas that are not related to well-known risks caused by sun exposure, skin colour, and pigmentation.

News release

From: QIMR Berghofer

QIMR Berghofer scientists have uncovered hundreds of genes that play a role in the growth of both moles and melanoma, in a discovery that could lead to new ways of preventing and treating the deadliest form of skin cancer.

The world’s largest genetics study of ‘moliness’, published in Nature Communications, is unravelling the complex causes of both moles and melanomas that are not related to well-known risks caused by sun exposure, skin colour, and pigmentation.

The team found risk genes linked to biological pathways that could lead to the development of a mole or melanoma. These include an immune response pathway that may be failing to control cell growth, and genes implicated in harmful cell proliferation in other types of cancer, such as breast cancer, prostate, and brain cancers.

Working out how to stop these risk pathways could lead to new melanoma drug targets and prevention strategies that go beyond sun protection.

Associate Professor Matthew Law, Team Head of QIMR Berghofer’s Genetics and Skin Cancer Lab, said research has made massive inroads but Australia still has the world’s highest incidence of melanoma. Around 1,400 Australians lose their lives to the complex disease each year.

“We know how to reduce sun exposure and risk through SunSmart behaviours, and new immunotherapies have greatly improved survival rates. But people still get melanoma and people still die from melanoma,” A/Prof Law said.

“Existing immunotherapies fail to work for half of all patients with late-stage melanoma, so we need to find other ways to target the disease. By studying moles, we’re learning more about the biology of melanoma so we can find new ways of controlling it.”

Moles and melanomas share the same cellular origin, forming from a pigment-producing cell called a melanocyte that gives skin its colour. In moles, the cell multiplies to form a cluster then stops growing, leaving a harmless spot. In melanoma, the cell growth continues aggressively.

Moliness is strongly influenced by your genes and having a high mole count is a major risk factor for melanoma. Around a third of melanomas develop from a mole.

The QIMR Berghofer research analysed data from more than 85,000 participants of European ancestry discovering 24 new genetic regions that determine the number of moles someone has. This is a five-fold increase on the five areas found in an earlier 2018 study also led by QIMR Berghofer researchers.

All but one of the genetic regions for mole count also play a role in melanoma. The team pinpointed more than 250 key genes in these regions to prioritise for further research.

One of the new genes, SIKE1, regulates immune responses to viral infections. The researchers think it could enable the development of melanomas by malfunctioning and affecting the immune system’s ability to detect and destroy melanocytes that are multiplying abnormally. This could be a promising target for a potential immunotherapy that could possibly prevent early stage melanoma growth.

Lead author Shanika Jayasinghe from QIMR Berghofer said the study builds on decades of world-leading skin cancer research at the Institute which has been involved in every major study of the genetics of moles and melanomas from twin studies to large-scale genome-wide research.

“I’m really proud to be continuing this long legacy of research. Our study increases understanding of why some people have a lot of moles and why some people develop melanoma so we can better treat and prevent this skin cancer,” Ms Jayasinghe said.

The researchers used the study insights to create a Polygenic Risk Score (PRS) for moliness to predict those who are genetically more likely to have a large number of moles, which could be integrated into melanoma screening tools in future to improve their accuracy in finding those at high risk so they can receive extra monitoring.

The next step is to analyse even larger data sets to find more genetic regions involved in moliness and melanoma. The researchers are also searching for existing drugs that could potentially target the newly identified biological pathways.

The scientists are grateful for the contribution of the many patients who participated in the 13 studies that were analysed for this project, including QIMR Berghofer’s QSkin Sun and Health Study and the Australian Genetics of Depression Study.

The study is available in Nature Communicationswith DOI 10.1038/s41467-026-70368-5.

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Genetics of ‘moliness’ helping unravel mysteries of melanoma

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Nature Communications
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Organisation/s: QIMR Berghofer, The University of Queensland, Queensland University of Technology (QUT), The University of Western Australia, University of Tasmania
Funder: S.M. is supported by an Investigator grant (2034568) from the Australian National Health and Medical Research Council (NHMRC). D.C.W. is supported by an NHMRC Investigator grant (APP2026567). M.M.I. is supported in part by the National Institute for Health and Care Research (NIHR) Leeds Biomedical Research Centre (BRC) (NIHR203331). The views expressed are those of the author(s) and not necessarily those of the NHS, the NIHR, or the Department of Health and Social Care. S.E.M. is supported by NHMRC grants APP1172917 and APP2025674. N.K.H. is supported by the NHMRC (APP1195581), Jan Brown, the Buck Off Melanoma community, and memorial donors honoring Nicola Laws. S.S.Y.L. is supported by a Western Australia Future Health Research and Innovation Emerging Leaders Fellowship. This work was conducted using the UK Biobank Resource (application number 25331). We acknowledge the contribution of the data from the published nevus meta-analysis in 20185 and the melanoma meta-analysis in 20206. All studies are forever grateful for the invaluable contributions of all research participants, their families, research nurses, research assistants, and support staff, whose dedication made this work possible. Please see Supplementary Methods for more details of acknowledgments and financial support for contributing studies.
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