Nearly 4000 genetic variations found to influence our smoking and drinking habits

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With all the Christmas parties afoot, it might surprise you to know that our smoking and drinking habits are also influenced by our genes and Australian scientists have helped identify nearly 4000 genetic variants that may play a role.  The genes were linked to a number of characteristics including the number of alcoholic drinks we drink each week and the age at which people started smoking. The researchers also looked across 4 ancestry groups (African, American, East Asian and European ancestries), and found that the majority of these genetic variants had consistent effects across different ancestries. 

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From: Springer Nature

Large GWAS identifies variants associated with drinking and smoking

Nearly 4,000 genetic associations for smoking and drinking behaviours have been identified in a multi-ancestry genome-wide association study (GWAS) involving almost 3.4 million individuals. The findings, published in Nature this week, shed more light on potential genetic influences on these complicated behaviours.

Smoking and drinking are major risk factors for various diseases and disorders. Although they can be affected by environmental factors such as cultural context and public health policies, there is strong evidence that genetics also contributes to tobacco and alcohol use. Previous GWASs, in which genetic data from many people are compared to identify potentially relevant genes, focused largely on individuals of European ancestry, whereas little is known about the genetic contribution to these behaviours in other populations.

Scott Vrieze, Dajiang Liu and colleagues assembled and analysed GWAS data from 60 cohorts containing almost 3.4 million individuals representing 4 ancestry groups (African, American, East Asian and European ancestries). More than 20% of the study cohort are from non-European ancestries. They identified nearly 4,000 genetic variants that are associated with smoking or drinking behaviours, including the age at which individuals started smoking and the number of alcoholic drinks consumed per week. The researchers found that the majority of these variants showed consistent effects across different ancestries. However, polygenic scores (a measure of genetic association based on the collective influence of multiple genetic variants), when trained on data from individuals with European ancestry, had reduced predictive performance in populations without European ancestry compared to those with European ancestry. This finding suggests that the transferability of such scores across ancestries remains challenging.

The findings improve our understanding of genetic factors associated with smoking and drinking behaviours and highlight the importance of increased sample size and diverse ancestry in such studies.

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Nature
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Organisation/s: QIMR Berghofer Medical Research Institute, The University of Sydney, The University of Queensland, Queensland University of Technology (QUT), University of Minnesota, USA
Funder: This study was supported by funding from US National Institutes of Health awards R56HG011035, R01DA044283, R01DA042755 and U01DA041120 to S.V., and R01GM126479, R56HG011035, R03OD032630, R01HG011035 and R56HG012358 to D.J.L. G.R.B.S. was also supported by National Institutes of Health award T32DA050560. D.J.L. and X.W. were in part supported by the Penn State College of Medicine’s Biomedical Informatics and Artificial Intelligence Program in the Strategic Plan. See paper for list of competing interests.
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