New genes linked to obesity risk identified

Publicly released:
International
Photo by Diana Polekhina on Unsplash
Photo by Diana Polekhina on Unsplash

International researchers have identified new genes that are linked to obesity risk, a discovery they say could one day help explain what influences obesity and how to treat it. The researchers used data from the UK to examine the genes of over 400,000 people, and identified several that were associated with BMI. They say faulty variants of three genes - DIDO1, PTPRG, and SLC12A5 - were linked to higher BMI in women but not men, while two others were linked with BMI in men and another two influenced body size, specifically in childhood. The researchers say many of these genes are also involved in DNA damage response and cell death, but there is currently no well-understood biological reason why this would be linked to body size.

Media release

From: Cell Press

Scientists tie obesity to sex- and age-specific genes

From influencing how our body stores fat to how our brain regulates appetite, hundreds of genes, along with environmental factors, collectively determine our weight and body size. Now, researchers add several genes, which appear to affect obesity risk in certain sexes and ages, to that list. The study, published on August 2 in the journal Cell Genomics, may shed light on new biological pathways that underlie obesity and highlight how sex and age contribute to health and disease.

"There are a million and one reasons why we should be thinking about sex, age, and other specific mechanisms rather than just lumping everyone together and assuming that disease mechanism works the same way for everyone,” says senior author John Perry (@jrbperry), a geneticist and professor at the Wellcome-MRC Institute of Metabolic Science, University of Cambridge, U.K. We're not expecting people to have completely different biology, but you can imagine things like hormones and physiology can contribute to specific risks.”

To untangle sex's role in obesity risk, the research team sequenced the exome—the protein-coding part of the genome—of 414,032 adults from the UK Biobank study. They looked at variants, or mutations, within genes associated with body mass index (BMI) in men and women, respectively. Based on height and weight, BMI is an estimated measurement of obesity. The search turned up five genes influencing BMI in women and two in men.

Among them, faulty variants of three genes—DIDO1, PTPRG, and SLC12A5—are linked to higher BMI in women, up to nearly 8 kg/m² more, while having no effect on men. Over 80% of the women with DIDO1 and SLC12A5 variants had obesity, as approximated by their BMI. Individuals carrying DIDO1 variants had stronger associations with higher testosterone levels and increased waist-to-hip ratio, both risk indicators for obesity-related complications like diabetes and heart disease. Others with SLC12A5 variants had higher odds of having type 2 diabetes compared with non-carriers. These findings highlight previously unexplored genes that are implicated in the development of obesity in women but not men.

Perry and his colleague then repeated their method to look for age-specific factors by searching for gene variants associated with childhood body size based on participants’ recollections. They identified two genes, OBSCN and MADD, that were not previously linked to childhood body size and fat. While carriers of OBSCN variants had higher odds of having higher weight as a child, MADD variant carriers were associated with smaller body sizes. In addition, the genetic variants acting on MADD had no association with adult obesity risk, highlighting age-specific effects on body size.

"What's quite surprising is that if you look at the function of some of these genes that we identified, several are clearly involved in DNA damage response and cell death,” says Perry. Obesity is a brain-related disorder, whereas biological and environmental factors act to influence appetite. "There's currently no well-understood biological paradigm for how DNA damage response would influence body size. These findings have given us a signpost to suggest variation in this important biological process may play a role in the etiology of obesity.”

Next, the research team hopes to replicate the study in a larger and more diverse population. They also plan to study the genes in animals to peer into their function and relationship with obesity.

"We're at the very earliest stages of identifying interesting biology,” says Perry. "We hope the study can reveal new biological pathways that may one day pave the way to new drug discovery for obesity."

Multimedia

Graphical Abstract
Graphical Abstract

Attachments

Note: Not all attachments are visible to the general public. Research URLs will go live after the embargo ends.

Research Cell Press, Web page The URL will go live after the embargo ends
Journal/
conference:
Cell Genomics
Research:Paper
Organisation/s: University of Cambridge, UK
Funder: This work was funded by the Medical Research Council (Unit programs: MC_UU_12015/2, MC_UU_00006/2, MC_UU_00014/4). L.D. is a Royal Society Dorothy Hodgkin Fellow. Research in the S.P.J. lab is funded by Cancer Research UK Discovery Grant (DRCPGM\100005), CRUK RadNet Cambridge (C17918/A28870), ERC Synergy grant DDREAMM (855741), and core funding was provided by CRUK Cambridge Institute (A:29580). This project has received funding from CRUK DRCPGM\100005 and C6/A18796 (C.C. and F.P.) and Wellcome Investigator Award 206388/Z/17/Z (G.Z.V.). Gurdon Institute core infrastructure funding was provided by Cancer Research UK (C6946/ A24843) and Wellcome (WT203144).
Media Contact/s
Contact details are only visible to registered journalists.